BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB021F09SP1|AL427795
(537 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1373 1024 0.0
>3x_Contig1373
Length = 6197
Score = 1024 bits (511), Expect = 0.0
Identities = 526/537 (97%)
Strand = Plus / Minus
Query: 1 tcagaaacgtaaatvcgggtggatctcatataaagatgatgggattctttcgttcatatg 60
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3978 tcagaaacgtaaatccgggtggatctcatataaagatgatgggattctttcgttcatatg 3919
Query: 61 gcagaaacgttatatggwactgtcagawgcgtatttgtcactatacaagamagaacaaac 120
||||||||||||||||| ||||||||| |||||||||||||||||||||| |||||||||
Sbjct: 3918 gcagaaacgttatatggtactgtcagatgcgtatttgtcactatacaagacagaacaaac 3859
Query: 121 tataagagaaacgcctgtgatgcagatcccgtaaacgagtattgtcagtgtttctagaaa 180
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 3858 tataagagaaacgcctgtgatgcagatcccgttaacgagtattgtcagtgtttctagaaa 3799
Query: 181 tcaattgaaacagaattgttttgagatcattagadcawcttctgcaaacggatmgatgcc 240
|||||||||||||||||||||||||||||||||| || ||||||||||||||| ||||||
Sbjct: 3798 tcaattgaaacagaattgttttgagatcattagatcatcttctgcaaacggatcgatgcc 3739
Query: 241 gatgtcagccagtcaggatgggagtragaagtctatttatatctctaccaagaccgaact 300
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 3738 gatgtcagccagtcaggatgggagtaagaagtctatttatatctctaccaagaccgaact 3679
Query: 301 tgaactacatacttggctcgatgcaattttcgctagatgcccattgcttagcggtgtgtc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3678 tgaactacatacttggctcgatgcaattttcgctagatgcccattgcttagcggtgtgtc 3619
Query: 361 ttctccaaccaatttcacacatagggttcatgttgggttcgacccggagactggatcctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3618 ttctccaaccaatttcacacatagggttcatgttgggttcgacccggagactggatcctt 3559
Query: 421 cgtcggtatgccatcaaattgggagaaattattgaagcattctagaattacaggtgaaga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3558 cgtcggtatgccatcaaattgggagaaattattgaagcattctagaattacaggtgaaga 3499
Query: 481 ctggaataataattcggctgctgttattcaagtactamaattctaacaagagtataa 537
||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||
Sbjct: 3498 ctggaataataattcggctgctgttattcaagtactacaattctaccaagagtataa 3442
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2953
Number of Sequences: 1807
Number of extensions: 2953
Number of successful extensions: 58
Number of sequences better than 1.0e-20: 1
length of query: 537
length of database: 10,358,551
effective HSP length: 16
effective length of query: 521
effective length of database: 10,329,639
effective search space: 5381741919
effective search space used: 5381741919
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.5 bits)
S2: 50 (100.7 bits)